Tired of out-of-memory errors derailing your data analysis? There's a better way to handle huge arrays in Python.

The AGP format is a tab-separated table format describing how components of a genome assembly fit together. NCBI accepts assemblies for submission in the format of a fasta file giving the sequences of ...

The goal of this pipeline is to perform cgMLST on bacterial genomes. As input, it requires an assembly for each sample you want to analyze in the form of a single ‘.fasta’ file. Importantly, the ...